Xilizhra wrote...
Shepard's never been around them for more than an hour. Sovereign flew away on Eden Prime rather quickly, was never physically near Shepard on Virmire, and only manifested through Sovereign on the Citadel.
In 2, I see your point, but she wasn't inside the Reaper long enough for indoctrination to take hold, especially when there's no active mind guiding it; that can take days or weeks. And for Object Rho, Shepard was only near it for one battle (of course, Kenson could have imprisoned Shepard in the room with the object so that she would be more likely to be indoctrinated, but then again, indoctrination makes you stupid; I'm guessing that's why she revealed all the details about how the Project worked even though she wanted to stop it).
I would say that this is a highly intelligent argument, and makes sense on every point.
On Eden Prime he was near Sovereign/Nazarra for less than one minute - and that was from a heck of a distance.
On Virmire he was never even in sight the whole time - it was just a hologram.
On the Citadel Shep was in vacuum - which means that all of the sound portions of Indoctrination were removed (according to the Codex). Also, Nazarra/Sovereign was likely working on the battle rather than indoctrinating as his servant Saren was implanted.
The IFF mission was fast paced, hard hitting, and overwith all too quickly in my opinion. It seemed that the Reaper was using the lowest level of indoctrination as part of its defense mechanisms, and likely did not need the indoctrination field on at all out in the middle of space when it got spanked and killed. It took the cerberus team a long time to become indoctrinated - the monitord even mention days with headaches.
For object Rho in Arrival he was in the room with it for a very short time. After the object knocked him out he was removed to a supposedly distant location from it. Indoctrination may also work more slowly on unconscious victims. Amanda Kenson did give Shepard all of the info to stop the Arrival and may have subconsciously protected him with what little of her mind was left, much like Liarra's mother Benezia did..
We also do not know for sure if some of Shepards 'rebuilding' from the Lazarus Project included any prototype upgrades designed to fight or cancel Indoctrination.