It's like destroy/conserve the collector base. Shepard, paragon writes it off as an abomination whereas the Illusive Man thinks that it would do more good to save it in the long run, regardless of the people who died. Synthesis and Control can be just as fear based, becoming a Reaper AI god if you will or turning everyone into something else based on the fear of continued organic/synthetic problems. The narration was based on informing us of the situation in a short time period and Stargazer scene was even there in refuse.
You reforged life because you were scared that it was the only way they could live. They are not as they were and anyone who has watched and listened to EDI and Legion develop into individuals- it's a process, just like organics have, maybe organics don't quite understand it but they weren't less alive for lacking organic parts and vice versa.
But at least if the reapers restart the cycle, you've given them the means to indoctrinate synthetics. All the Stargazer scene could mean is blissful ignorance right before they start a harvest after having gradually indoctrinated everyone and the vague details were what the reapers wanted everyone to know. Enjoy your utopia.
Hehe, yeahhh no, let's not kid ourselves. Destroy ending thrives off of fear, mainly fear of the unknown. Choosing to become the new leader of an all-powerful army and changing the fabric of all organic life are much gutsier decisions to make than sacrificing an entirely-military species (no civilians at all) for guaranteed victory (a luxury that never comes with true sacrifice). No big scary Reapers to worry about, either.
If I didn't know better I'd almost think you were projecting something! 
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