My apologies, it wasn't my intention to come off as a whiner - if I did. I was just venting frustration. A bit too quickly too since I seem to have forgotten that this was the same issue you originally were having with downloading the file. Google think we're both robots, I guess. I feel your pain, my follow synthetic.
The lack of a save button seems to effect a few people since I saw comments on the blog of people complaining about that as well. No clue what thats about, honestly. I'm not a programmer. I applied the xml and exe you supplied and I was still able to see the Save button. I don't suppose screen resolution could cause it - the box being made too small to fit the button. I notice that on mine the end of the "Open ME3" box that lists the ME3 location ends shortly before it gets under the minimize _ button. On yours it takes up a lot more space, expanding out to be under the fullscreen button.
This could have NOTHING to do with resolution, I don't know, but I've seen some programs before in the past that didn't scale properly to the screen resolution and thus made certain buttons unreachable in the window. So maybe? What resolution is your monitor running at?
Using the files you provided I re-ran the program again to make another save. However I'm skeptical the difference will be there. I don't believe what you have is the latest version either. Notice this screengrab from the latest provided on the blog:

There are two options missing from the Misc section. To quote the guide these two are:
- Adjust ScalarParameters - this will copy things like skin and hair luminosity and reflectiveness.
- Adjust VectorParameters - this will copy things like eye and hair colour.
So the save I provide may be no different from the previous one because of that.
http://www.filedropper.com/save1000_1
One thing I noticed, btw, is that when I load up the saves by default "ignore vertex" is not selected. In our screencap it is. Did you select it yourself or is that how it comes up by default for you?