I just completed the reaper IFF mission and recruited Legion. Normandy has been attacked but i saved it with joker. But talking to Legion I have another mission house devided.
I am wondering if i should take it or go straight to the final showdown i have done all my loyalty missions.
I take it you don't care about spoilers here? If not: how do you feel about Gabby and Kelly? Would you like to keep them alive? If so, go to the Omega 4 relay right away. You can do Legion's loyalty mission after the Suicide Mission. Just be careful how you use Legion during the mission so you don't lose him. Don't take him to the final fight. Don't send him through the vents. Be sure to leave two of Garrus, Grunt, and Zaeed behind when you fly off for the final fight. Consult the Suicide Mission guide at the top of this forum for how to keep your team alive.
Hold on a second. If I remember correctly it goes: Reaper IFF mission -> recruiting legion. After that I talk to legion and do his loyality mission. Then the "normandy under attack" mission triggers. After that I go through the relay and all of my crew survive.
If you hit the galaxy map before you talk to Legion and get his loyalty mission you will trigger the kidnapping. So it is best to avoid hitting the galaxy map until you have talked to Legion and gotten his loyalty mission. Having an active loyalty mission in your journal will delay the kidnapping for up to two missions after getting the IFF.
Thanks i must have triggered the Normandy attack when i went shopping after reaper . i will do the Omiga 4 relay next 
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